BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A08LP1|AL427417
(944 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig658 817 0.0
3x_Contig1148 797 0.0
>3x_Contig658
Length = 2378
Score = 817 bits (412), Expect = 0.0
Identities = 415/416 (99%)
Strand = Plus / Minus
Query: 1 gatcatagatatcgatattttccgtcatattagaactggtgaaatatcctgcatggaatg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 423 gatcatagatatcgatattttccgtcctattagaactggtgaaatatcctgcatggaatg 364
Query: 61 ataacataagtgtggggttgtaagcatagcaccattttcatgccgtcacattagctgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ataacataagtgtggggttgtaagcatagcaccattttcatgccgtcacattagctgctc 304
Query: 121 atttttttttttgtggtcctatcccgttgtctcattgcaaatcaatttaatctgacatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atttttttttttgtggtcctatcccgttgtctcattgcaaatcaatttaatctgacatct 244
Query: 181 gtcgacgacacaaaaaacttgacacaaagttgaaaataaattcataagagagaagtttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtcgacgacacaaaaaacttgacacaaagttgaaaataaattcataagagagaagtttac 184
Query: 241 aaaagcatataaagggtaactcacaccagtaaaacattattcaatcctctaaagtgggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aaaagcatataaagggtaactcacaccagtaaaacattattcaatcctctaaagtgggtg 124
Query: 301 gctgtttctactttgtgatatttttttgtggttcttttggatatttgtcctattcatgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gctgtttctactttgtgatatttttttgtggttcttttggatatttgtcctattcatgtg 64
Query: 361 attccattattttacatctttgaaggattaaacctagtacaaataataagatagaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 attccattattttacatctttgaaggattaaacctagtacaaataataagatagaa 8
>3x_Contig1148
Length = 4745
Score = 797 bits (402), Expect = 0.0
Identities = 423/426 (99%), Gaps = 3/426 (0%)
Strand = Plus / Plus
Query: 519 tgtgtacaatatagaaactccgaatacatttctgaatcaagaaaagataatagttttctg 578
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgtgtacaatatagaa-ctccgaatacatttctgaatcaagaaaagataatagttttctg 60
Query: 579 tcatttagcgagtgaaagttaatcattgcaaaccggaccgttttgaaccatttgcttatt 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcatttagcgagtgaaagttaatcattgcaaaccggaccgttttgaaccatttgcttatt 120
Query: 639 agtattttcatctttcaaggcagagatcatgtcattcgaagctgaatcctcgttgacgtt 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtattttcatctttcaaggcagagatcatgtcattcgaagctgaatcctcgttgacgtt 180
Query: 699 aagtgatattcctttgaatattcaaaggaataataatatacatcatcatggtaacagtaa 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagtgatattcctttgaatattcaaaggaataataatatacatcatcatggtaacagtaa 240
Query: 759 atactcgcttgtgaaaggtttgatgggtaag-actgttaagaatgaaaggtgtaattcca 817
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 241 atactcgcttgtgaaaggtttgatgggtaagcactgttaagaatgaaaggtgtaattcca 300
Query: 818 agaaggaggaagagaataccgctgaacaaagtgatgatgatgaagatgacgaaaataata 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaaggaggaagagaataccgctgaacaaagtgatgatgatgaagatgacgaaaataata 360
Query: 878 acggtaatagtagtaataatcaccatcagcatcacggcagaggtgag-aatcttatcagc 936
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 361 acggtaatagtagtaataatcaccatcagcatcacggcagaggtgagaaatcttatcagc 420
Query: 937 atcaaa 942
||||||
Sbjct: 421 atcaaa 426
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,769
Number of Sequences: 1807
Number of extensions: 14769
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 2
length of query: 944
length of database: 10,358,551
effective HSP length: 16
effective length of query: 928
effective length of database: 10,329,639
effective search space: 9585904992
effective search space used: 9585904992
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)